Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Gm25125-201ENSMUST00000083340 136 ntBASIC14.16□□□□□ -0.14
Hoxc9P09633 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hoxc9P09633 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hoxc9P09633 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Hoxc9P09633 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hoxc9P09633 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Hoxc9P09633 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc9P09633 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc9P09633 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.15□□□□□ -0.14
Hoxc9P09633 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxc9P09633 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc9P09633 Mir291b-201ENSMUST00000104838 79 ntBASIC14.15□□□□□ -0.14
Hoxc9P09633 Gm16518-201ENSMUST00000117960 508 ntBASIC14.15□□□□□ -0.14
Hoxc9P09633 Gm15746-201ENSMUST00000120684 1027 ntBASIC14.15□□□□□ -0.14
Hoxc9P09633 Gm14148-201ENSMUST00000122433 1008 ntBASIC14.15□□□□□ -0.14
Hoxc9P09633 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC14.15□□□□□ -0.14
Hoxc9P09633 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC14.15□□□□□ -0.14
Hoxc9P09633 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC14.15□□□□□ -0.14
Hoxc9P09633 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC14.15□□□□□ -0.14
Hoxc9P09633 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Hoxc9P09633 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxc9P09633 AC141884.2-201ENSMUST00000228811 775 ntBASIC14.15□□□□□ -0.14
Hoxc9P09633 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC14.15□□□□□ -0.14
Hoxc9P09633 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc9P09633 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc9P09633 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc9P09633 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Hoxc9P09633 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Gm6755-201ENSMUST00000100598 864 ntBASIC14.14□□□□□ -0.15
Hoxc9P09633 Gm6740-201ENSMUST00000100617 864 ntBASIC14.14□□□□□ -0.15
Hoxc9P09633 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Gm37858-201ENSMUST00000192759 1231 ntBASIC14.14□□□□□ -0.15
Hoxc9P09633 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Gm8796-201ENSMUST00000219122 936 ntBASIC14.14□□□□□ -0.15
Hoxc9P09633 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Gm3791-201ENSMUST00000220790 768 ntBASIC14.14□□□□□ -0.15
Hoxc9P09633 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC14.14□□□□□ -0.15
Hoxc9P09633 AC102523.1-201ENSMUST00000228706 1144 ntBASIC14.14□□□□□ -0.15
Hoxc9P09633 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc9P09633 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc9P09633 Gm29245-201ENSMUST00000187332 1416 ntBASIC14.14□□□□□ -0.15
Hoxc9P09633 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc9P09633 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms