Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.69□□□□□ -0.7
Cdh17Q9R100 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Gm37826-201ENSMUST00000195329 322 ntBASIC10.69□□□□□ -0.7
Cdh17Q9R100 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.69□□□□□ -0.7
Cdh17Q9R100 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Gm17831-201ENSMUST00000205579 900 ntBASIC10.69□□□□□ -0.7
Cdh17Q9R100 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.69□□□□□ -0.7
Cdh17Q9R100 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.69□□□□□ -0.7
Cdh17Q9R100 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.69□□□□□ -0.7
Cdh17Q9R100 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh17Q9R100 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.68□□□□□ -0.7
Cdh17Q9R100 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.68□□□□□ -0.7
Cdh17Q9R100 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.68□□□□□ -0.7
Cdh17Q9R100 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Gm25076-201ENSMUST00000104098 132 ntBASIC10.68□□□□□ -0.7
Cdh17Q9R100 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Gm15264-201ENSMUST00000118050 502 ntBASIC10.68□□□□□ -0.7
Cdh17Q9R100 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.68□□□□□ -0.7
Cdh17Q9R100 Gm13284-201ENSMUST00000121020 547 ntBASIC10.68□□□□□ -0.7
Cdh17Q9R100 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Snord55-201ENSMUST00000174939 79 ntBASIC10.68□□□□□ -0.7
Cdh17Q9R100 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.68□□□□□ -0.7
Cdh17Q9R100 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Gm31941-201ENSMUST00000209689 350 ntBASIC10.68□□□□□ -0.7
Cdh17Q9R100 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdh17Q9R100 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.68□□□□□ -0.7
Cdh17Q9R100 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms