Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gm15197-201ENSMUST00000120526 478 ntBASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gm17391-201ENSMUST00000171036 126 ntBASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Snord55-201ENSMUST00000174939 79 ntBASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gm10731-201ENSMUST00000181171 448 ntBASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gm3508-201ENSMUST00000186012 792 ntBASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gm5599-201ENSMUST00000209602 788 ntBASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim29Q8R2Q0 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Gm30946-201ENSMUST00000198288 724 ntBASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim29Q8R2Q0 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms