Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Vps53Q8CCB4 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Vps53Q8CCB4 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Vps53Q8CCB4 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vps53Q8CCB4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vps53Q8CCB4 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.83□□□□□ -0.35
Vps53Q8CCB4 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vps53Q8CCB4 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vps53Q8CCB4 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm12783-201ENSMUST00000121425 397 ntBASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm43778-201ENSMUST00000199438 199 ntBASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm7504-201ENSMUST00000201449 424 ntBASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.83□□□□□ -0.36
Vps53Q8CCB4 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps53Q8CCB4 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Gm14270-201ENSMUST00000118388 846 ntBASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Gm22846-201ENSMUST00000157706 270 ntBASIC12.82□□□□□ -0.36
Vps53Q8CCB4 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Gm9353-201ENSMUST00000200472 604 ntBASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Gm42867-201ENSMUST00000202995 469 ntBASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms