Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clcn1Q64347 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.11□□□□□ -0.15
Clcn1Q64347 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm5822-201ENSMUST00000161562 1378 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clcn1Q64347 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Snord17-201ENSMUST00000104526 238 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm11380-201ENSMUST00000118067 560 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm11952-201ENSMUST00000121172 821 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm37197-201ENSMUST00000195607 401 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm9353-201ENSMUST00000200472 604 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm43452-201ENSMUST00000201873 991 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 AC172027.1-201ENSMUST00000217659 337 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm5178-201ENSMUST00000219380 898 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 AC154435.1-201ENSMUST00000223938 959 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 AC142266.1-201ENSMUST00000228107 415 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm43980-201ENSMUST00000204899 1612 ntBASIC14.1□□□□□ -0.15
Clcn1Q64347 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn1Q64347 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Clcn1Q64347 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Gm42141-201ENSMUST00000196534 2172 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Gm42499-201ENSMUST00000196193 1412 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Mir181d-201ENSMUST00000102383 72 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Gm22937-201ENSMUST00000103954 131 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 Gm13204-201ENSMUST00000120110 821 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 Gm14113-201ENSMUST00000121399 976 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Gm12906-201ENSMUST00000154610 441 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Clcn1Q64347 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Gm19927-201ENSMUST00000185792 781 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 Gm45094-201ENSMUST00000207013 617 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms