Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.25□□□□□ -0.77
Sox2P48432 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.25□□□□□ -0.77
Sox2P48432 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.25□□□□□ -0.77
Sox2P48432 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox2P48432 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox2P48432 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sox2P48432 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox2P48432 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox2P48432 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.25□□□□□ -0.77
Sox2P48432 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox2P48432 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sox2P48432 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.25□□□□□ -0.77
Sox2P48432 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox2P48432 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Sox2P48432 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox2P48432 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox2P48432 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sox2P48432 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Sox2P48432 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox2P48432 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.25□□□□□ -0.77
Sox2P48432 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox2P48432 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox2P48432 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sox2P48432 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Sox2P48432 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Gm7742-201ENSMUST00000167648 1527 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Gm7732-201ENSMUST00000170486 1527 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Gm7740-201ENSMUST00000186171 1527 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Gm7736-201ENSMUST00000096981 1527 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Gm14130-201ENSMUST00000118417 987 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.24□□□□□ -0.77
Sox2P48432 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.24□□□□□ -0.77
Sox2P48432 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
Sox2P48432 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Gm27320-201ENSMUST00000184892 109 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Gm42859-201ENSMUST00000199572 193 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Gm3961-201ENSMUST00000204425 994 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.24□□□□□ -0.77
Sox2P48432 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Sox2P48432 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.24□□□□□ -0.77
Sox2P48432 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Sox2P48432 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC10.24□□□□□ -0.77
Sox2P48432 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox2P48432 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.24□□□□□ -0.77
Sox2P48432 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Sox2P48432 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Rims2-204ENSMUST00000226410 3685 ntBASIC10.23□□□□□ -0.77
Sox2P48432 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sox2P48432 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Gm12501-201ENSMUST00000119163 529 ntBASIC10.23□□□□□ -0.77
Sox2P48432 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.23□□□□□ -0.77
Sox2P48432 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.23□□□□□ -0.77
Sox2P48432 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.23□□□□□ -0.77
Sox2P48432 Gm19246-201ENSMUST00000173599 255 ntBASIC10.23□□□□□ -0.77
Sox2P48432 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.23□□□□□ -0.77
Sox2P48432 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Gm6082-201ENSMUST00000215204 454 ntBASIC10.23□□□□□ -0.77
Sox2P48432 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.23□□□□□ -0.77
Sox2P48432 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sox2P48432 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox2P48432 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms