Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Rrp8Q9DB85 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm12947-201ENSMUST00000116114 420 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm22344-201ENSMUST00000122642 278 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm25288-201ENSMUST00000122800 265 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm17796-201ENSMUST00000189015 1213 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm43854-201ENSMUST00000200418 394 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rrp8Q9DB85 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Gm5395-201ENSMUST00000121650 915 ntBASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Gm16288-201ENSMUST00000137940 367 ntBASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Gm24954-201ENSMUST00000178831 110 ntBASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Gm7765-201ENSMUST00000182585 974 ntBASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.82□□□□□ -0.68
Rrp8Q9DB85 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Mir326-201ENSMUST00000083637 95 ntBASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rrp8Q9DB85 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms