Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC103672.1-201ENSMUST00000227502 365 ntBASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx6-1Q99MA9 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm23132-201ENSMUST00000104254 132 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm12947-201ENSMUST00000116114 420 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm4917-201ENSMUST00000121452 650 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm4705-201ENSMUST00000177415 354 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm5808-201ENSMUST00000178090 357 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm26875-201ENSMUST00000181006 950 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Mir8091-201ENSMUST00000183602 139 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm19927-201ENSMUST00000185792 781 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm18351-201ENSMUST00000188646 883 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm37293-201ENSMUST00000191658 295 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm43811-201ENSMUST00000202862 695 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx6-1Q99MA9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm24933-201ENSMUST00000103762 110 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm23252-201ENSMUST00000103776 110 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm15074-201ENSMUST00000117603 936 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm11380-201ENSMUST00000118067 560 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms