Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm7666-201ENSMUST00000146631 819 ntBASIC11.39□□□□□ -0.59
Trim60Q8VI40 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm25492-201ENSMUST00000157383 129 ntBASIC11.39□□□□□ -0.59
Trim60Q8VI40 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm28450-201ENSMUST00000187349 638 ntBASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm37835-201ENSMUST00000193305 361 ntBASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm1821-202ENSMUST00000227415 750 ntBASIC11.39□□□□□ -0.59
Trim60Q8VI40 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.39□□□□□ -0.59
Trim60Q8VI40 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.39□□□□□ -0.59
Trim60Q8VI40 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.38□□□□□ -0.59
Trim60Q8VI40 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Gm7255-201ENSMUST00000187371 908 ntBASIC11.38□□□□□ -0.59
Trim60Q8VI40 Gm10774-201ENSMUST00000188689 204 ntBASIC11.38□□□□□ -0.59
Trim60Q8VI40 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.38□□□□□ -0.59
Trim60Q8VI40 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.38□□□□□ -0.59
Trim60Q8VI40 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim60Q8VI40 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.37□□□□□ -0.59
Trim60Q8VI40 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.37□□□□□ -0.59
Trim60Q8VI40 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.37□□□□□ -0.59
Trim60Q8VI40 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.37□□□□□ -0.59
Trim60Q8VI40 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.37□□□□□ -0.59
Trim60Q8VI40 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim60Q8VI40 Mir5132-201ENSMUST00000175166 71 ntBASIC11.37□□□□□ -0.59
Trim60Q8VI40 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.37□□□□□ -0.59
Trim60Q8VI40 Mir7070-201ENSMUST00000183657 86 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms