Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.83□□□□□ -0.68
Trim31Q8R0K2 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Snora73b-201ENSMUST00000083419 205 ntBASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim31Q8R0K2 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Gm4294-201ENSMUST00000105169 614 ntBASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Gm14942-201ENSMUST00000119642 336 ntBASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Gm3329-201ENSMUST00000159873 556 ntBASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Mir7076-201ENSMUST00000183519 74 ntBASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Gm37458-201ENSMUST00000194055 410 ntBASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Gm43520-201ENSMUST00000197996 164 ntBASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim31Q8R0K2 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim31Q8R0K2 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim31Q8R0K2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim31Q8R0K2 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trim31Q8R0K2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim31Q8R0K2 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms