Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Gm18733-202ENSMUST00000174447 401 ntBASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Gm37852-201ENSMUST00000193027 350 ntBASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 BC106175-202ENSMUST00000219344 1213 ntBASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm13047-201ENSMUST00000117116 815 ntBASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm14274-201ENSMUST00000117182 615 ntBASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm18014-201ENSMUST00000183369 817 ntBASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm33080-201ENSMUST00000205429 172 ntBASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh3rf2Q8BZT2 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms