Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
H3f3aP84244 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC9.82□□□□□ -0.84
H3f3aP84244 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
H3f3aP84244 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.82□□□□□ -0.84
H3f3aP84244 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC9.82□□□□□ -0.84
H3f3aP84244 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC9.82□□□□□ -0.84
H3f3aP84244 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.82□□□□□ -0.84
H3f3aP84244 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
H3f3aP84244 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
H3f3aP84244 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.82□□□□□ -0.84
H3f3aP84244 Gm45592-201ENSMUST00000209605 1043 ntBASIC9.82□□□□□ -0.84
H3f3aP84244 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.82□□□□□ -0.84
H3f3aP84244 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.82□□□□□ -0.84
H3f3aP84244 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Gm25125-201ENSMUST00000083340 136 ntBASIC9.82□□□□□ -0.84
H3f3aP84244 Gm25580-201ENSMUST00000083409 327 ntBASIC9.82□□□□□ -0.84
H3f3aP84244 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.82□□□□□ -0.84
H3f3aP84244 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.82□□□□□ -0.84
H3f3aP84244 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
H3f3aP84244 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
H3f3aP84244 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.82□□□□□ -0.84
H3f3aP84244 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.82□□□□□ -0.84
H3f3aP84244 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.82□□□□□ -0.84
H3f3aP84244 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
H3f3aP84244 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.82□□□□□ -0.84
H3f3aP84244 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
H3f3aP84244 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3aP84244 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
H3f3aP84244 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
H3f3aP84244 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
H3f3aP84244 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
H3f3aP84244 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
H3f3aP84244 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
H3f3aP84244 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
H3f3aP84244 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm13117-201ENSMUST00000120894 691 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Gm13937-201ENSMUST00000121000 988 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Gm11952-201ENSMUST00000121172 821 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Gm10169-201ENSMUST00000121822 348 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Gm13182-201ENSMUST00000122241 312 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm15744-201ENSMUST00000161734 213 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Mir6407-201ENSMUST00000184510 101 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm42518-201ENSMUST00000196277 938 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
H3f3aP84244 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm45758-201ENSMUST00000212448 1006 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm29787-201ENSMUST00000222129 849 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Gm19009-201ENSMUST00000223072 823 ntBASIC9.81□□□□□ -0.84
H3f3aP84244 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
H3f3aP84244 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
H3f3aP84244 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.81□□□□□ -0.84
H3f3aP84244 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3aP84244 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms