Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Gm12165-201ENSMUST00000117047 342 ntBASIC10.38□□□□□ -0.75
Gbx1P82976 Gm15236-201ENSMUST00000117309 379 ntBASIC10.38□□□□□ -0.75
Gbx1P82976 Gm4909-201ENSMUST00000118749 794 ntBASIC10.38□□□□□ -0.75
Gbx1P82976 Gm16219-201ENSMUST00000120096 274 ntBASIC10.38□□□□□ -0.75
Gbx1P82976 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Gbx1P82976 Gm4654-201ENSMUST00000183305 982 ntBASIC10.38□□□□□ -0.75
Gbx1P82976 Mir8115-201ENSMUST00000184992 119 ntBASIC10.38□□□□□ -0.75
Gbx1P82976 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.38□□□□□ -0.75
Gbx1P82976 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.38□□□□□ -0.75
Gbx1P82976 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC10.38□□□□□ -0.75
Gbx1P82976 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.38□□□□□ -0.75
Gbx1P82976 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.38□□□□□ -0.75
Gbx1P82976 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.38□□□□□ -0.75
Gbx1P82976 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Gbx1P82976 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Gbx1P82976 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Gbx1P82976 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.38□□□□□ -0.75
Gbx1P82976 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Gbx1P82976 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Gbx1P82976 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gbx1P82976 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Gbx1P82976 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gbx1P82976 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.37□□□□□ -0.75
Gbx1P82976 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gbx1P82976 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Gbx1P82976 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Gm23272-201ENSMUST00000104053 129 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Gm11956-201ENSMUST00000119525 512 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 Gm11573-201ENSMUST00000119956 394 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 Gm14126-201ENSMUST00000122345 395 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 Mir1896-201ENSMUST00000122641 81 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Gm23699-201ENSMUST00000158835 135 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Gbx1P82976 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Gbx1P82976 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.37□□□□□ -0.75
Gbx1P82976 Gm29199-201ENSMUST00000187766 775 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 Gm37301-201ENSMUST00000195412 568 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Gbx1P82976 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.37□□□□□ -0.75
Gbx1P82976 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Gbx1P82976 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Gbx1P82976 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Gbx1P82976 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gbx1P82976 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Gbx1P82976 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.37□□□□□ -0.75
Gbx1P82976 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gbx1P82976 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms