Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.08□□□□□ -0.8
Nkx2-2P42586 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.08□□□□□ -0.8
Nkx2-2P42586 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.08□□□□□ -0.8
Nkx2-2P42586 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.08□□□□□ -0.8
Nkx2-2P42586 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.08□□□□□ -0.8
Nkx2-2P42586 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-2P42586 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-2P42586 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.08□□□□□ -0.8
Nkx2-2P42586 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-2P42586 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.07□□□□□ -0.8
Nkx2-2P42586 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm13888-201ENSMUST00000119148 422 ntBASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm11667-201ENSMUST00000119828 486 ntBASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm13019-201ENSMUST00000120000 276 ntBASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm13117-201ENSMUST00000120894 691 ntBASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm37852-201ENSMUST00000193027 350 ntBASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm6677-201ENSMUST00000195100 441 ntBASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm5865-201ENSMUST00000198713 637 ntBASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.07□□□□□ -0.8
Nkx2-2P42586 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.07□□□□□ -0.8
Nkx2-2P42586 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-2P42586 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Nkx2-2P42586 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx2-2P42586 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms