Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm18730-201ENSMUST00000218038 343 ntBASIC9.58□□□□□ -0.88
UbbP0CG49 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.58□□□□□ -0.88
UbbP0CG49 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.58□□□□□ -0.88
UbbP0CG49 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.58□□□□□ -0.88
UbbP0CG49 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
UbbP0CG49 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.58□□□□□ -0.88
UbbP0CG49 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.58□□□□□ -0.88
UbbP0CG49 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
UbbP0CG49 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
UbbP0CG49 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.57□□□□□ -0.88
UbbP0CG49 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
UbbP0CG49 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
UbbP0CG49 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
UbbP0CG49 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.57□□□□□ -0.88
UbbP0CG49 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
UbbP0CG49 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Gm24891-201ENSMUST00000104391 136 ntBASIC9.57□□□□□ -0.88
UbbP0CG49 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.57□□□□□ -0.88
UbbP0CG49 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.57□□□□□ -0.88
UbbP0CG49 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.57□□□□□ -0.88
UbbP0CG49 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Gm25226-201ENSMUST00000158198 123 ntBASIC9.57□□□□□ -0.88
UbbP0CG49 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
UbbP0CG49 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.57□□□□□ -0.88
UbbP0CG49 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.57□□□□□ -0.88
UbbP0CG49 Gm44262-201ENSMUST00000204969 372 ntBASIC9.57□□□□□ -0.88
UbbP0CG49 Gm32111-201ENSMUST00000207689 846 ntBASIC9.57□□□□□ -0.88
UbbP0CG49 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.57□□□□□ -0.88
UbbP0CG49 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
UbbP0CG49 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
UbbP0CG49 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
UbbP0CG49 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
UbbP0CG49 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.56□□□□□ -0.88
UbbP0CG49 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.56□□□□□ -0.88
UbbP0CG49 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.56□□□□□ -0.88
UbbP0CG49 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
UbbP0CG49 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
UbbP0CG49 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
UbbP0CG49 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.56□□□□□ -0.88
UbbP0CG49 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.56□□□□□ -0.88
UbbP0CG49 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
UbbP0CG49 Gm4294-201ENSMUST00000105169 614 ntBASIC9.56□□□□□ -0.88
UbbP0CG49 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Gm12579-201ENSMUST00000118040 783 ntBASIC9.56□□□□□ -0.88
UbbP0CG49 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Gm12501-201ENSMUST00000119163 529 ntBASIC9.56□□□□□ -0.88
UbbP0CG49 Gm15549-201ENSMUST00000121595 622 ntBASIC9.56□□□□□ -0.88
UbbP0CG49 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.56□□□□□ -0.88
UbbP0CG49 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
UbbP0CG49 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
UbbP0CG49 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms