Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim13Q9CYB0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Gm22885-201ENSMUST00000157410 107 ntBASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Gm26083-201ENSMUST00000157904 193 ntBASIC10.21□□□□□ -0.77
Trim13Q9CYB0 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Gm27627-201ENSMUST00000183644 150 ntBASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Gm7430-201ENSMUST00000193824 1144 ntBASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Gm13097-201ENSMUST00000210722 397 ntBASIC10.21□□□□□ -0.77
Trim13Q9CYB0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Trim13Q9CYB0 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Gm37965-201ENSMUST00000195304 1362 ntBASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trim13Q9CYB0 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms