Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Nkd1Q99MH6 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.4□□□□□ -0.75
Nkd1Q99MH6 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm7851-201ENSMUST00000117574 323 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm11450-201ENSMUST00000121144 333 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm9089-201ENSMUST00000122027 526 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm24844-201ENSMUST00000158679 127 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm9540-201ENSMUST00000188230 478 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm43852-201ENSMUST00000202098 917 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkd1Q99MH6 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.39□□□□□ -0.75
Nkd1Q99MH6 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Gm25148-201ENSMUST00000104611 123 ntBASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.38□□□□□ -0.75
Nkd1Q99MH6 Gm27552-201ENSMUST00000183351 62 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms