Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Gm37458-201ENSMUST00000194055 410 ntBASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Gm23680-201ENSMUST00000083162 164 ntBASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga4Q91XY4 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Gm25766-201ENSMUST00000104101 131 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Gm26013-201ENSMUST00000104404 119 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Gm12274-201ENSMUST00000120062 385 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Gm14395-201ENSMUST00000120494 563 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Gm43520-201ENSMUST00000197996 164 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 AC073947.1-201ENSMUST00000216991 649 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Gm5468-202ENSMUST00000227851 682 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga4Q91XY4 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm14892-201ENSMUST00000117636 267 ntBASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm13182-201ENSMUST00000122241 312 ntBASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms