Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim52Q8CDV4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim52Q8CDV4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim52Q8CDV4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim52Q8CDV4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim52Q8CDV4 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim52Q8CDV4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim52Q8CDV4 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim52Q8CDV4 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Gm5472-201ENSMUST00000178604 1678 ntBASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Gm8019-201ENSMUST00000119317 587 ntBASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Gm26368-201ENSMUST00000157826 118 ntBASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Gm5808-201ENSMUST00000178090 357 ntBASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Gm5340-201ENSMUST00000203733 880 ntBASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 AC155300.1-201ENSMUST00000219134 480 ntBASIC13.56□□□□□ -0.24
Trim52Q8CDV4 AC152169.1-201ENSMUST00000223901 701 ntBASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim52Q8CDV4 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Pck2-205ENSMUST00000226352 2784 ntBASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Mir326-201ENSMUST00000083637 95 ntBASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Rgr-203ENSMUST00000225070 4704 ntBASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Gm6768-201ENSMUST00000022467 1878 ntBASIC13.55□□□□□ -0.24
Trim52Q8CDV4 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms