Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 AC130217.1-201ENSMUST00000224146 909 ntBASIC15.42■□□□□ 0.06
Usp54Q8BL06 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp54Q8BL06 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp54Q8BL06 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp54Q8BL06 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
Usp54Q8BL06 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp54Q8BL06 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Usp54Q8BL06 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC15.42■□□□□ 0.06
Usp54Q8BL06 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp54Q8BL06 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp54Q8BL06 AC126257.2-201ENSMUST00000215507 2300 ntBASIC15.42■□□□□ 0.06
Usp54Q8BL06 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp54Q8BL06 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Usp54Q8BL06 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp54Q8BL06 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp54Q8BL06 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp54Q8BL06 AC122860.2-201ENSMUST00000217967 2671 ntBASIC15.41■□□□□ 0.06
Usp54Q8BL06 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm12254-201ENSMUST00000134617 471 ntBASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm23999-201ENSMUST00000158057 104 ntBASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm7672-201ENSMUST00000180915 872 ntBASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm40332-201ENSMUST00000199847 938 ntBASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 AC149294.3-201ENSMUST00000226888 732 ntBASIC15.41■□□□□ 0.06
Usp54Q8BL06 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm9790-201ENSMUST00000054148 288 ntBASIC15.41■□□□□ 0.06
Usp54Q8BL06 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm32914-201ENSMUST00000203815 2228 ntBASIC15.41■□□□□ 0.06
Usp54Q8BL06 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC15.41■□□□□ 0.06
Usp54Q8BL06 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Gm26532-201ENSMUST00000180630 690 ntBASIC15.41■□□□□ 0.06
Usp54Q8BL06 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp54Q8BL06 Mir341-201ENSMUST00000093593 96 ntBASIC15.41■□□□□ 0.06
Usp54Q8BL06 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Gm24161-201ENSMUST00000104592 130 ntBASIC15.4■□□□□ 0.06
Usp54Q8BL06 Gm12420-201ENSMUST00000119869 1048 ntBASIC15.4■□□□□ 0.06
Usp54Q8BL06 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC15.4■□□□□ 0.06
Usp54Q8BL06 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Mir7088-201ENSMUST00000184227 86 ntBASIC15.4■□□□□ 0.06
Usp54Q8BL06 Gm8022-201ENSMUST00000191763 904 ntBASIC15.4■□□□□ 0.06
Usp54Q8BL06 CT025642.1-201ENSMUST00000224734 1219 ntBASIC15.4■□□□□ 0.06
Usp54Q8BL06 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp54Q8BL06 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.39■□□□□ 0.06
Usp54Q8BL06 Gm37697-201ENSMUST00000195680 1844 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms