Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm8959-201ENSMUST00000213150 571 ntBASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Gm5369-201ENSMUST00000217499 588 ntBASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Gm10288-201ENSMUST00000084614 537 ntBASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ctdp1Q7TSG2 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdp1Q7TSG2 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Olfml3-204ENSMUST00000169286 874 ntBASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Gm5523-201ENSMUST00000180415 997 ntBASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Gm27530-201ENSMUST00000184096 98 ntBASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdp1Q7TSG2 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Gm11331-201ENSMUST00000119764 288 ntBASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Gm29787-201ENSMUST00000222129 849 ntBASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdp1Q7TSG2 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms