Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rad54bQ6PFE3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rad54bQ6PFE3 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rad54bQ6PFE3 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm23272-201ENSMUST00000104053 129 ntBASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm15264-201ENSMUST00000118050 502 ntBASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm30946-201ENSMUST00000198288 724 ntBASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm45398-201ENSMUST00000210561 165 ntBASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm1821-202ENSMUST00000227415 750 ntBASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rad54bQ6PFE3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Gm14277-201ENSMUST00000121195 360 ntBASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Gm37246-201ENSMUST00000192665 835 ntBASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Gm18042-201ENSMUST00000219887 790 ntBASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Ginm1-202ENSMUST00000065124 300 ntBASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Gm23105-201ENSMUST00000083719 134 ntBASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rad54bQ6PFE3 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.09□□□□□ -0.63
Rad54bQ6PFE3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rad54bQ6PFE3 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.09□□□□□ -0.63
Rad54bQ6PFE3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rad54bQ6PFE3 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rad54bQ6PFE3 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rad54bQ6PFE3 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rad54bQ6PFE3 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms