Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm5174-201ENSMUST00000171131 1423 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 AC154640.1-203ENSMUST00000228316 1618 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm13426-201ENSMUST00000117887 795 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm7539-201ENSMUST00000189789 630 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm42449-201ENSMUST00000200349 2258 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Chd4Q6PDQ2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Gm12435-201ENSMUST00000118949 1016 ntBASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Gm23582-201ENSMUST00000158530 139 ntBASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Mir6973a-201ENSMUST00000183646 78 ntBASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Gm45041-201ENSMUST00000207366 3108 ntBASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chd4Q6PDQ2 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm12489-201ENSMUST00000119364 148 ntBASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm29304-201ENSMUST00000186555 695 ntBASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm28179-201ENSMUST00000188365 613 ntBASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm29223-201ENSMUST00000188867 695 ntBASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm37921-201ENSMUST00000194333 695 ntBASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm42859-201ENSMUST00000199572 193 ntBASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm44540-201ENSMUST00000205640 354 ntBASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chd4Q6PDQ2 Gm37697-201ENSMUST00000195680 1844 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms