Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm15003-201ENSMUST00000118884 446 ntBASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm18201-201ENSMUST00000174735 875 ntBASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm24328-201ENSMUST00000175104 67 ntBASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm34379-201ENSMUST00000195036 290 ntBASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm7880-201ENSMUST00000203748 871 ntBASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm5178-201ENSMUST00000219380 898 ntBASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm24791-201ENSMUST00000104284 131 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm29107-201ENSMUST00000190910 347 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm42430-201ENSMUST00000197209 616 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm8679-201ENSMUST00000210651 1036 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm7589-201ENSMUST00000085631 534 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rc3h1Q4VGL6 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms