Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nhlrc4Q3UP44 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm11380-201ENSMUST00000118067 560 ntBASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm11573-201ENSMUST00000119956 394 ntBASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm9081-201ENSMUST00000182346 991 ntBASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm37301-201ENSMUST00000195412 568 ntBASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm3726-201ENSMUST00000203110 785 ntBASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm9139-201ENSMUST00000218817 700 ntBASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm16380-201ENSMUST00000077997 478 ntBASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nhlrc4Q3UP44 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Nhlrc4Q3UP44 Gm25063-201ENSMUST00000104666 94 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms