Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Gm11544-201ENSMUST00000120215 382 ntBASIC12.97□□□□□ -0.33
Col5a2Q3U962 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Gm5873-201ENSMUST00000177157 1066 ntBASIC12.97□□□□□ -0.33
Col5a2Q3U962 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.97□□□□□ -0.33
Col5a2Q3U962 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Gm42617-201ENSMUST00000197640 1229 ntBASIC12.97□□□□□ -0.33
Col5a2Q3U962 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col5a2Q3U962 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC12.96□□□□□ -0.33
Col5a2Q3U962 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.96□□□□□ -0.33
Col5a2Q3U962 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Gm4865-201ENSMUST00000196284 1309 ntBASIC12.96□□□□□ -0.33
Col5a2Q3U962 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col5a2Q3U962 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col5a2Q3U962 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col5a2Q3U962 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.96□□□□□ -0.34
Col5a2Q3U962 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col5a2Q3U962 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.96□□□□□ -0.34
Col5a2Q3U962 Gm23479-201ENSMUST00000158876 122 ntBASIC12.96□□□□□ -0.34
Col5a2Q3U962 Mir3100-201ENSMUST00000174918 65 ntBASIC12.96□□□□□ -0.34
Col5a2Q3U962 Gm2716-201ENSMUST00000212350 643 ntBASIC12.96□□□□□ -0.34
Col5a2Q3U962 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC12.96□□□□□ -0.34
Col5a2Q3U962 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC12.96□□□□□ -0.34
Col5a2Q3U962 Gm19090-201ENSMUST00000218187 774 ntBASIC12.96□□□□□ -0.34
Col5a2Q3U962 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.96□□□□□ -0.34
Col5a2Q3U962 AC127583.1-201ENSMUST00000224351 540 ntBASIC12.96□□□□□ -0.34
Col5a2Q3U962 AC159006.3-201ENSMUST00000226918 664 ntBASIC12.96□□□□□ -0.34
Col5a2Q3U962 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col5a2Q3U962 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Col5a2Q3U962 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col5a2Q3U962 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Col5a2Q3U962 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Col5a2Q3U962 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col5a2Q3U962 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Gm21963-201ENSMUST00000179519 330 ntBASIC12.95□□□□□ -0.34
Col5a2Q3U962 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Gm36980-201ENSMUST00000195643 622 ntBASIC12.95□□□□□ -0.34
Col5a2Q3U962 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC12.95□□□□□ -0.34
Col5a2Q3U962 AC130217.1-201ENSMUST00000224146 909 ntBASIC12.95□□□□□ -0.34
Col5a2Q3U962 AC114585.2-201ENSMUST00000227693 486 ntBASIC12.95□□□□□ -0.34
Col5a2Q3U962 Gm8615-201ENSMUST00000025307 771 ntBASIC12.95□□□□□ -0.34
Col5a2Q3U962 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Gm6713-201ENSMUST00000216137 1446 ntBASIC12.95□□□□□ -0.34
Col5a2Q3U962 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a2Q3U962 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a2Q3U962 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a2Q3U962 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a2Q3U962 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms