Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lig3P97386 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lig3P97386 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lig3P97386 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lig3P97386 Gm6092-201ENSMUST00000121659 2029 ntBASIC12.15□□□□□ -0.47
Lig3P97386 Gm19165-201ENSMUST00000204453 1982 ntBASIC12.14□□□□□ -0.47
Lig3P97386 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lig3P97386 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lig3P97386 Gm11560-201ENSMUST00000117567 948 ntBASIC12.14□□□□□ -0.47
Lig3P97386 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lig3P97386 Gm14270-201ENSMUST00000118388 846 ntBASIC12.14□□□□□ -0.47
Lig3P97386 Gm11578-201ENSMUST00000118530 459 ntBASIC12.14□□□□□ -0.47
Lig3P97386 Gm14247-201ENSMUST00000120950 237 ntBASIC12.14□□□□□ -0.47
Lig3P97386 Gm12453-201ENSMUST00000121981 331 ntBASIC12.14□□□□□ -0.47
Lig3P97386 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.14□□□□□ -0.47
Lig3P97386 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.14□□□□□ -0.47
Lig3P97386 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.14□□□□□ -0.47
Lig3P97386 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.14□□□□□ -0.47
Lig3P97386 Gm42816-201ENSMUST00000198433 325 ntBASIC12.14□□□□□ -0.47
Lig3P97386 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.14□□□□□ -0.47
Lig3P97386 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lig3P97386 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lig3P97386 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC12.14□□□□□ -0.47
Lig3P97386 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Lig3P97386 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.13□□□□□ -0.47
Lig3P97386 Gm8303-201ENSMUST00000178371 1762 ntBASIC12.13□□□□□ -0.47
Lig3P97386 Gm8331-201ENSMUST00000178433 1762 ntBASIC12.13□□□□□ -0.47
Lig3P97386 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lig3P97386 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lig3P97386 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.13□□□□□ -0.47
Lig3P97386 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lig3P97386 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.13□□□□□ -0.47
Lig3P97386 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lig3P97386 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.13□□□□□ -0.47
Lig3P97386 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.13□□□□□ -0.47
Lig3P97386 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Lig3P97386 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.13□□□□□ -0.47
Lig3P97386 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.13□□□□□ -0.47
Lig3P97386 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.13□□□□□ -0.47
Lig3P97386 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.13□□□□□ -0.47
Lig3P97386 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Gm17931-201ENSMUST00000208132 634 ntBASIC12.13□□□□□ -0.47
Lig3P97386 BC106175-202ENSMUST00000219344 1213 ntBASIC12.13□□□□□ -0.47
Lig3P97386 Gm18968-201ENSMUST00000221319 862 ntBASIC12.13□□□□□ -0.47
Lig3P97386 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Olfr584-201ENSMUST00000098210 964 ntBASIC12.13□□□□□ -0.47
Lig3P97386 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lig3P97386 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lig3P97386 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms