Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Gm23132-201ENSMUST00000104254 132 ntBASIC11.03□□□□□ -0.64
Atxn1P54254 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC11.03□□□□□ -0.64
Atxn1P54254 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Atxn1P54254 Gm15329-201ENSMUST00000121408 155 ntBASIC11.03□□□□□ -0.64
Atxn1P54254 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.03□□□□□ -0.64
Atxn1P54254 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.03□□□□□ -0.64
Atxn1P54254 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.03□□□□□ -0.64
Atxn1P54254 Mir7051-201ENSMUST00000184167 73 ntBASIC11.03□□□□□ -0.64
Atxn1P54254 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.03□□□□□ -0.64
Atxn1P54254 Gm37207-201ENSMUST00000194284 296 ntBASIC11.03□□□□□ -0.64
Atxn1P54254 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.03□□□□□ -0.64
Atxn1P54254 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.03□□□□□ -0.64
Atxn1P54254 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Atxn1P54254 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.03□□□□□ -0.64
Atxn1P54254 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Atxn1P54254 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Atxn1P54254 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Atxn1P54254 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.03□□□□□ -0.64
Atxn1P54254 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.03□□□□□ -0.64
Atxn1P54254 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.03□□□□□ -0.64
Atxn1P54254 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.02□□□□□ -0.64
Atxn1P54254 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Atxn1P54254 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Atxn1P54254 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Atxn1P54254 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Atxn1P54254 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Atxn1P54254 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Atxn1P54254 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Atxn1P54254 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Atxn1P54254 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Atxn1P54254 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Atxn1P54254 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Atxn1P54254 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Atxn1P54254 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Atxn1P54254 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.02□□□□□ -0.65
Atxn1P54254 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Atxn1P54254 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Atxn1P54254 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Atxn1P54254 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.02□□□□□ -0.65
Atxn1P54254 Gm4775-201ENSMUST00000169588 402 ntBASIC11.02□□□□□ -0.65
Atxn1P54254 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.02□□□□□ -0.65
Atxn1P54254 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.02□□□□□ -0.65
Atxn1P54254 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.02□□□□□ -0.65
Atxn1P54254 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Atxn1P54254 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.02□□□□□ -0.65
Atxn1P54254 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.02□□□□□ -0.65
Atxn1P54254 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.02□□□□□ -0.65
Atxn1P54254 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.02□□□□□ -0.65
Atxn1P54254 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.02□□□□□ -0.65
Atxn1P54254 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.02□□□□□ -0.65
Atxn1P54254 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Atxn1P54254 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Atxn1P54254 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.02□□□□□ -0.65
Atxn1P54254 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Atxn1P54254 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Atxn1P54254 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atxn1P54254 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms