Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Cdx2P43241 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.51□□□□□ -0.73
Cdx2P43241 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Gm16209-201ENSMUST00000118457 627 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm6441-201ENSMUST00000120983 696 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Gm10171-201ENSMUST00000126220 628 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm4943-201ENSMUST00000132879 424 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.51□□□□□ -0.73
Cdx2P43241 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC10.51□□□□□ -0.73
Cdx2P43241 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cdx2P43241 Gm6291-201ENSMUST00000179994 309 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.51□□□□□ -0.73
Cdx2P43241 Gm8601-201ENSMUST00000182096 909 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm28671-201ENSMUST00000187036 692 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm7445-201ENSMUST00000192115 340 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm2345-201ENSMUST00000193451 589 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.51□□□□□ -0.73
Cdx2P43241 Gm6794-201ENSMUST00000203829 457 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC10.51□□□□□ -0.73
Cdx2P43241 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.51□□□□□ -0.73
Cdx2P43241 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.51□□□□□ -0.73
Cdx2P43241 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm25514-201ENSMUST00000083860 135 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Gm10233-201ENSMUST00000089275 628 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Cdx2P43241 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.51□□□□□ -0.73
Cdx2P43241 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.5□□□□□ -0.73
Cdx2P43241 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdx2P43241 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cdx2P43241 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cdx2P43241 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC10.5□□□□□ -0.73
Cdx2P43241 Gm14034-201ENSMUST00000120147 551 ntBASIC10.5□□□□□ -0.73
Cdx2P43241 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC10.5□□□□□ -0.73
Cdx2P43241 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.5□□□□□ -0.73
Cdx2P43241 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Gm8756-201ENSMUST00000183250 929 ntBASIC10.5□□□□□ -0.73
Cdx2P43241 Mir6359-201ENSMUST00000183668 81 ntBASIC10.5□□□□□ -0.73
Cdx2P43241 Platr10-202ENSMUST00000191479 818 ntBASIC10.5□□□□□ -0.73
Cdx2P43241 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
Cdx2P43241 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.5□□□□□ -0.73
Cdx2P43241 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.5□□□□□ -0.73
Cdx2P43241 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cdx2P43241 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Cdx2P43241 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.5□□□□□ -0.73
Cdx2P43241 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cdx2P43241 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.5□□□□□ -0.73
Cdx2P43241 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.5□□□□□ -0.73
Cdx2P43241 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdx2P43241 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.5□□□□□ -0.73
Cdx2P43241 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdx2P43241 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.5□□□□□ -0.73
Cdx2P43241 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms