Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm43520-201ENSMUST00000197996 164 ntBASIC9.66□□□□□ -0.86
Upk2P38575 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.66□□□□□ -0.86
Upk2P38575 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.66□□□□□ -0.86
Upk2P38575 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.66□□□□□ -0.86
Upk2P38575 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.66□□□□□ -0.86
Upk2P38575 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.66□□□□□ -0.86
Upk2P38575 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.66□□□□□ -0.86
Upk2P38575 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.66□□□□□ -0.86
Upk2P38575 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.66□□□□□ -0.86
Upk2P38575 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Upk2P38575 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.65□□□□□ -0.86
Upk2P38575 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.65□□□□□ -0.86
Upk2P38575 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.65□□□□□ -0.86
Upk2P38575 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Upk2P38575 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.65□□□□□ -0.86
Upk2P38575 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Upk2P38575 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Upk2P38575 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.65□□□□□ -0.86
Upk2P38575 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.65□□□□□ -0.86
Upk2P38575 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC9.65□□□□□ -0.86
Upk2P38575 Gm25343-201ENSMUST00000157460 107 ntBASIC9.65□□□□□ -0.86
Upk2P38575 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.65□□□□□ -0.86
Upk2P38575 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.65□□□□□ -0.86
Upk2P38575 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.65□□□□□ -0.86
Upk2P38575 Id2-203ENSMUST00000222667 958 ntBASIC9.65□□□□□ -0.86
Upk2P38575 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.65□□□□□ -0.86
Upk2P38575 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Upk2P38575 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.65□□□□□ -0.86
Upk2P38575 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Upk2P38575 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Upk2P38575 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Upk2P38575 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Upk2P38575 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Upk2P38575 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.65□□□□□ -0.87
Upk2P38575 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Upk2P38575 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Upk2P38575 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Upk2P38575 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Upk2P38575 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Upk2P38575 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Upk2P38575 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.64□□□□□ -0.87
Upk2P38575 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Upk2P38575 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Upk2P38575 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Upk2P38575 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.64□□□□□ -0.87
Upk2P38575 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.64□□□□□ -0.87
Upk2P38575 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Upk2P38575 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms