Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Apoc1P34928 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Apoc1P34928 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Apoc1P34928 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.64□□□□□ -0.87
Apoc1P34928 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.64□□□□□ -0.87
Apoc1P34928 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.64□□□□□ -0.87
Apoc1P34928 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Apoc1P34928 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Apoc1P34928 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Apoc1P34928 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Apoc1P34928 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Apoc1P34928 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Apoc1P34928 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Apoc1P34928 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Gm13809-201ENSMUST00000117921 597 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Gm8731-201ENSMUST00000118088 412 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Gm15549-201ENSMUST00000121595 622 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.63□□□□□ -0.87
Apoc1P34928 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Apoc1P34928 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.63□□□□□ -0.87
Apoc1P34928 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Gm43058-201ENSMUST00000197645 625 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Gm7504-201ENSMUST00000201449 424 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.63□□□□□ -0.87
Apoc1P34928 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Apoc1P34928 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.63□□□□□ -0.87
Apoc1P34928 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Apoc1P34928 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Apoc1P34928 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.63□□□□□ -0.87
Apoc1P34928 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Apoc1P34928 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Apoc1P34928 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.63□□□□□ -0.87
Apoc1P34928 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.62□□□□□ -0.87
Apoc1P34928 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.62□□□□□ -0.87
Apoc1P34928 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Apoc1P34928 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Apoc1P34928 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.62□□□□□ -0.87
Apoc1P34928 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Apoc1P34928 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Apoc1P34928 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.62□□□□□ -0.87
Apoc1P34928 Gm14058-201ENSMUST00000116082 735 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms