Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Tnfrsf1bP25119 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Tnfrsf1bP25119 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Tnfrsf1bP25119 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Tnfrsf1bP25119 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Tnfrsf1bP25119 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Tnfrsf1bP25119 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Tnfrsf1bP25119 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Tnfrsf1bP25119 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm12274-201ENSMUST00000120062 385 ntBASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm5970-201ENSMUST00000131638 1216 ntBASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Snord55-201ENSMUST00000174939 79 ntBASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm26134-201ENSMUST00000178484 110 ntBASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm19009-201ENSMUST00000223072 823 ntBASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1bP25119 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Gm25554-201ENSMUST00000158075 113 ntBASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Gm15744-201ENSMUST00000161734 213 ntBASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.26□□□□□ -0.77
Tnfrsf1bP25119 Mir6407-201ENSMUST00000184510 101 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms