Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 AC158777.1-201ENSMUST00000226216 1724 ntBASIC8.03□□□□□ -1.12
TcraP01849 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
TcraP01849 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
TcraP01849 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC8.03□□□□□ -1.12
TcraP01849 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
TcraP01849 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
TcraP01849 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
TcraP01849 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC8.03□□□□□ -1.12
TcraP01849 Gm11989-201ENSMUST00000117240 672 ntBASIC8.03□□□□□ -1.12
TcraP01849 Gm11362-201ENSMUST00000118838 850 ntBASIC8.03□□□□□ -1.12
TcraP01849 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC8.03□□□□□ -1.12
TcraP01849 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC8.03□□□□□ -1.12
TcraP01849 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Gm2991-201ENSMUST00000173338 480 ntBASIC8.03□□□□□ -1.12
TcraP01849 Gm27046-201ENSMUST00000182160 463 ntBASIC8.03□□□□□ -1.12
TcraP01849 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 AC163667.3-201ENSMUST00000225774 222 ntBASIC8.03□□□□□ -1.12
TcraP01849 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC8.03□□□□□ -1.12
TcraP01849 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
TcraP01849 Gm44888-201ENSMUST00000209119 2541 ntBASIC8.03□□□□□ -1.12
TcraP01849 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC8.03□□□□□ -1.12
TcraP01849 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
TcraP01849 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
TcraP01849 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.12
TcraP01849 Gm42971-201ENSMUST00000199228 2079 ntBASIC8.02□□□□□ -1.12
TcraP01849 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
TcraP01849 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
TcraP01849 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
TcraP01849 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.12
TcraP01849 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
TcraP01849 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC8.02□□□□□ -1.13
TcraP01849 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
TcraP01849 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
TcraP01849 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TcraP01849 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC8.02□□□□□ -1.13
TcraP01849 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
TcraP01849 Gm5940-201ENSMUST00000117582 1068 ntBASIC8.02□□□□□ -1.13
TcraP01849 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC8.02□□□□□ -1.13
TcraP01849 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC8.02□□□□□ -1.13
TcraP01849 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TcraP01849 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC8.02□□□□□ -1.13
TcraP01849 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC8.02□□□□□ -1.13
TcraP01849 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TcraP01849 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC8.02□□□□□ -1.13
TcraP01849 Gm38266-201ENSMUST00000194931 421 ntBASIC8.02□□□□□ -1.13
TcraP01849 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC8.02□□□□□ -1.13
TcraP01849 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC8.02□□□□□ -1.13
TcraP01849 AC113031.8-201ENSMUST00000227856 631 ntBASIC8.02□□□□□ -1.13
TcraP01849 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Gm7399-201ENSMUST00000032395 858 ntBASIC8.02□□□□□ -1.13
TcraP01849 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
TcraP01849 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
TcraP01849 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TcraP01849 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TcraP01849 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms