Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm8731-201ENSMUST00000118088 412 ntBASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm24990-201ENSMUST00000157406 323 ntBASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gm15808-201ENSMUST00000119046 604 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gm8199-201ENSMUST00000121323 823 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gm21778-201ENSMUST00000178779 471 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gm28032-201ENSMUST00000184104 96 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gm29067-201ENSMUST00000190821 470 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gm19208-201ENSMUST00000213861 912 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gm10288-201ENSMUST00000084614 537 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.93□□□□□ -0.82
Pcdh1F7BJK1 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms