Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Gm25723-201ENSMUST00000104530 126 ntBASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Gm11701-201ENSMUST00000121277 1142 ntBASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Gm37819-201ENSMUST00000194626 1065 ntBASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh15Q99PJ1 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Mir704-201ENSMUST00000102106 77 ntBASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 AC116390.1-201ENSMUST00000227975 670 ntBASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh15Q99PJ1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Gm44547-201ENSMUST00000207793 1446 ntBASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Gm12961-201ENSMUST00000120507 1050 ntBASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Gm9771-201ENSMUST00000198267 1137 ntBASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 AC124581.2-201ENSMUST00000225459 282 ntBASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Gm38220-201ENSMUST00000195774 1447 ntBASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdh15Q99PJ1 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh15Q99PJ1 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh15Q99PJ1 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh15Q99PJ1 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh15Q99PJ1 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh15Q99PJ1 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 220.5 ms