Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
StrcQ8VIM6 Gm7251-201ENSMUST00000182661 1009 ntBASIC12.82□□□□□ -0.36
StrcQ8VIM6 Gm28381-201ENSMUST00000188403 193 ntBASIC12.82□□□□□ -0.36
StrcQ8VIM6 Rce1-203ENSMUST00000224707 1255 ntBASIC12.82□□□□□ -0.36
StrcQ8VIM6 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
StrcQ8VIM6 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
StrcQ8VIM6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.82□□□□□ -0.36
StrcQ8VIM6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
StrcQ8VIM6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
StrcQ8VIM6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
StrcQ8VIM6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
StrcQ8VIM6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
StrcQ8VIM6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
StrcQ8VIM6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
StrcQ8VIM6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
StrcQ8VIM6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
StrcQ8VIM6 Gm38309-201ENSMUST00000192063 1518 ntBASIC12.82□□□□□ -0.36
StrcQ8VIM6 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Zfp419-201ENSMUST00000173446 916 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm45780-201ENSMUST00000212089 224 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 AC154643.1-201ENSMUST00000225643 625 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm15033-201ENSMUST00000118188 673 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm9075-201ENSMUST00000168738 794 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm37819-201ENSMUST00000194626 1065 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm42764-201ENSMUST00000197835 741 ntTSL 5 BASIC12.81□□□□□ -0.36
StrcQ8VIM6 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 AC129590.1-201ENSMUST00000225573 852 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm8256-202ENSMUST00000227964 828 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 AC116390.1-201ENSMUST00000227975 670 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
StrcQ8VIM6 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.81□□□□□ -0.36
StrcQ8VIM6 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.8□□□□□ -0.36
StrcQ8VIM6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
StrcQ8VIM6 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.8□□□□□ -0.36
StrcQ8VIM6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Gm12774-201ENSMUST00000117881 416 ntBASIC12.8□□□□□ -0.36
StrcQ8VIM6 Gm12489-201ENSMUST00000119364 148 ntBASIC12.8□□□□□ -0.36
StrcQ8VIM6 Hsd17b13-203ENSMUST00000120320 1118 ntTSL 5 BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Gm12961-201ENSMUST00000120507 1050 ntBASIC12.8□□□□□ -0.36
StrcQ8VIM6 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Gm22982-201ENSMUST00000082613 319 ntBASIC12.8□□□□□ -0.36
StrcQ8VIM6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.8□□□□□ -0.36
StrcQ8VIM6 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.8□□□□□ -0.36
StrcQ8VIM6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
StrcQ8VIM6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms