Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm14592-201ENSMUST00000117201 560 ntBASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm13916-201ENSMUST00000117368 628 ntBASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm23085-201ENSMUST00000157849 293 ntBASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm7504-201ENSMUST00000201449 424 ntBASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm25125-201ENSMUST00000083340 136 ntBASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Gm21811-201ENSMUST00000096485 930 ntBASIC11.71□□□□□ -0.53
Trim43aQ3TL54 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trim43aQ3TL54 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm12196-201ENSMUST00000120954 262 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm13263-201ENSMUST00000121271 838 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm3150-201ENSMUST00000166418 204 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm8100-201ENSMUST00000182906 988 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm17825-201ENSMUST00000206836 794 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms