Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim7Q3TJD7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim7Q3TJD7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim7Q3TJD7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pdlim7Q3TJD7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim7Q3TJD7 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pdlim7Q3TJD7 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim7Q3TJD7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pdlim7Q3TJD7 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.4□□□□□ -0.43
Pdlim7Q3TJD7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm11540-201ENSMUST00000117457 780 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm11919-201ENSMUST00000117609 721 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm14176-201ENSMUST00000121302 477 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm7805-201ENSMUST00000154348 448 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm17782-201ENSMUST00000174345 880 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm20694-201ENSMUST00000176943 404 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm7833-201ENSMUST00000183288 990 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 AC125409.3-201ENSMUST00000223488 653 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 AC102523.1-201ENSMUST00000228706 1144 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gm10238-201ENSMUST00000089689 408 ntBASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim7Q3TJD7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Gm12345-201ENSMUST00000119288 898 ntBASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Gm6238-201ENSMUST00000120999 465 ntBASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Gm15258-201ENSMUST00000153801 741 ntBASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Gm2474-201ENSMUST00000195162 559 ntBASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Gm43117-201ENSMUST00000198531 379 ntBASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Gm3527-201ENSMUST00000198905 460 ntBASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Gm45745-201ENSMUST00000211447 1180 ntBASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Gm9619-201ENSMUST00000211587 762 ntBASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Gm5040-201ENSMUST00000218609 800 ntBASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim7Q3TJD7 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms