Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.23□□□□□ -0.45
Hmgb1P63158 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Hmgb1P63158 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Hmgb1P63158 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgb1P63158 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Gm15528-201ENSMUST00000117821 864 ntBASIC12.23□□□□□ -0.45
Hmgb1P63158 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgb1P63158 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.23□□□□□ -0.45
Hmgb1P63158 Gm18367-201ENSMUST00000176139 600 ntBASIC12.23□□□□□ -0.45
Hmgb1P63158 Gm36991-201ENSMUST00000191800 648 ntBASIC12.23□□□□□ -0.45
Hmgb1P63158 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hmgb1P63158 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hmgb1P63158 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgb1P63158 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgb1P63158 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.23□□□□□ -0.45
Hmgb1P63158 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Gm25125-201ENSMUST00000083340 136 ntBASIC12.23□□□□□ -0.45
Hmgb1P63158 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgb1P63158 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.23□□□□□ -0.45
Hmgb1P63158 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgb1P63158 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Hmgb1P63158 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgb1P63158 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgb1P63158 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gm45191-201ENSMUST00000205846 5439 ntBASIC12.22□□□□□ -0.45
Hmgb1P63158 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gm15352-201ENSMUST00000118696 270 ntBASIC12.22□□□□□ -0.45
Hmgb1P63158 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Hmgb1P63158 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Ginm1-202ENSMUST00000065124 300 ntBASIC12.22□□□□□ -0.45
Hmgb1P63158 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.22□□□□□ -0.45
Hmgb1P63158 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC12.22□□□□□ -0.45
Hmgb1P63158 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.22□□□□□ -0.45
Hmgb1P63158 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgb1P63158 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms