Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Rpl39P62892 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Rpl39P62892 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC7.82□□□□□ -1.16
Rpl39P62892 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Gm44913-201ENSMUST00000208060 2990 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC7.82□□□□□ -1.16
Rpl39P62892 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC7.82□□□□□ -1.16
Rpl39P62892 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Rpl39P62892 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm43972-201ENSMUST00000181398 1467 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
Rpl39P62892 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm44153-201ENSMUST00000204162 1580 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm3765-201ENSMUST00000130985 1447 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Rpl39P62892 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm11663-201ENSMUST00000117888 290 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Gm13829-201ENSMUST00000119600 138 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm8459-201ENSMUST00000162504 760 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm8856-201ENSMUST00000185254 1144 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm5714-201ENSMUST00000197343 566 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Gm6334-201ENSMUST00000207083 228 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC7.81□□□□□ -1.16
Rpl39P62892 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 AC130829.1-201ENSMUST00000221548 494 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Gm18615-201ENSMUST00000222919 1031 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 CT010486.3-201ENSMUST00000224555 811 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 AC123665.1-201ENSMUST00000228204 438 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm7742-201ENSMUST00000167648 1527 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Gm7732-201ENSMUST00000170486 1527 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Gm7740-201ENSMUST00000186171 1527 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Gm7736-201ENSMUST00000096981 1527 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm21817-201ENSMUST00000178584 2583 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm38376-201ENSMUST00000195493 2253 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Rpl39P62892 Gm43908-201ENSMUST00000205074 1472 ntBASIC7.81□□□□□ -1.16
Rpl39P62892 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rpl39P62892 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Rpl39P62892 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rpl39P62892 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rpl39P62892 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rpl39P62892 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms