Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Gm10288-201ENSMUST00000084614 537 ntBASIC10.31□□□□□ -0.76
Sox2P48432 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Sox2P48432 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Sox2P48432 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox2P48432 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sox2P48432 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sox2P48432 Gm8111-201ENSMUST00000117659 987 ntBASIC10.3□□□□□ -0.76
Sox2P48432 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.3□□□□□ -0.76
Sox2P48432 Gm11941-201ENSMUST00000119904 610 ntBASIC10.3□□□□□ -0.76
Sox2P48432 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Sox2P48432 Gm25881-201ENSMUST00000157783 103 ntBASIC10.3□□□□□ -0.76
Sox2P48432 Gm25226-201ENSMUST00000158198 123 ntBASIC10.3□□□□□ -0.76
Sox2P48432 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Gm3150-201ENSMUST00000166418 204 ntBASIC10.3□□□□□ -0.76
Sox2P48432 Gm8100-201ENSMUST00000182906 988 ntBASIC10.3□□□□□ -0.76
Sox2P48432 Gm28746-201ENSMUST00000187453 380 ntBASIC10.3□□□□□ -0.76
Sox2P48432 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.3□□□□□ -0.76
Sox2P48432 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.3□□□□□ -0.76
Sox2P48432 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.3□□□□□ -0.76
Sox2P48432 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.3□□□□□ -0.76
Sox2P48432 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.3□□□□□ -0.76
Sox2P48432 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.3□□□□□ -0.76
Sox2P48432 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Sox2P48432 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.3□□□□□ -0.76
Sox2P48432 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Sox2P48432 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Sox2P48432 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
Sox2P48432 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sox2P48432 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.3□□□□□ -0.76
Sox2P48432 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sox2P48432 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.3□□□□□ -0.76
Sox2P48432 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.3□□□□□ -0.76
Sox2P48432 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Sox2P48432 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Sox2P48432 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sox2P48432 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.29□□□□□ -0.76
Sox2P48432 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sox2P48432 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Sox2P48432 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sox2P48432 Gm13263-201ENSMUST00000121271 838 ntBASIC10.29□□□□□ -0.76
Sox2P48432 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.29□□□□□ -0.76
Sox2P48432 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Gm25890-201ENSMUST00000177643 165 ntBASIC10.29□□□□□ -0.76
Sox2P48432 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.29□□□□□ -0.76
Sox2P48432 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Sox2P48432 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.29□□□□□ -0.76
Sox2P48432 Gm22614-201ENSMUST00000178300 165 ntBASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms