Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Msh2P43247 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Msh2P43247 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Msh2P43247 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.4□□□□□ -0.58
Msh2P43247 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Msh2P43247 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Msh2P43247 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Msh2P43247 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.4□□□□□ -0.58
Msh2P43247 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Msh2P43247 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Msh2P43247 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.4□□□□□ -0.59
Msh2P43247 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Msh2P43247 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.4□□□□□ -0.59
Msh2P43247 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Msh2P43247 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Msh2P43247 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.4□□□□□ -0.59
Msh2P43247 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.59
Msh2P43247 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Msh2P43247 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Rims2-204ENSMUST00000226410 3685 ntBASIC11.39□□□□□ -0.59
Msh2P43247 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Msh2P43247 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Msh2P43247 Gm22920-201ENSMUST00000102175 109 ntBASIC11.39□□□□□ -0.59
Msh2P43247 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Msh2P43247 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Msh2P43247 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.39□□□□□ -0.59
Msh2P43247 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.39□□□□□ -0.59
Msh2P43247 Gm7666-201ENSMUST00000146631 819 ntBASIC11.39□□□□□ -0.59
Msh2P43247 Gm24844-201ENSMUST00000158679 127 ntBASIC11.39□□□□□ -0.59
Msh2P43247 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.39□□□□□ -0.59
Msh2P43247 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Msh2P43247 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.39□□□□□ -0.59
Msh2P43247 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.39□□□□□ -0.59
Msh2P43247 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Msh2P43247 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.39□□□□□ -0.59
Msh2P43247 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Msh2P43247 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.39□□□□□ -0.59
Msh2P43247 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.39□□□□□ -0.59
Msh2P43247 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.39□□□□□ -0.59
Msh2P43247 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Msh2P43247 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Msh2P43247 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Msh2P43247 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.39□□□□□ -0.59
Msh2P43247 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Msh2P43247 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.38□□□□□ -0.59
Msh2P43247 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.38□□□□□ -0.59
Msh2P43247 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.38□□□□□ -0.59
Msh2P43247 Gm23061-201ENSMUST00000102348 116 ntBASIC11.38□□□□□ -0.59
Msh2P43247 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.38□□□□□ -0.59
Msh2P43247 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.38□□□□□ -0.59
Msh2P43247 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.38□□□□□ -0.59
Msh2P43247 Gm22144-201ENSMUST00000157402 102 ntBASIC11.38□□□□□ -0.59
Msh2P43247 Mir3102-201ENSMUST00000175555 104 ntBASIC11.38□□□□□ -0.59
Msh2P43247 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Gm38321-201ENSMUST00000195053 235 ntBASIC11.38□□□□□ -0.59
Msh2P43247 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.38□□□□□ -0.59
Msh2P43247 Gm44506-201ENSMUST00000206278 965 ntBASIC11.38□□□□□ -0.59
Msh2P43247 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.38□□□□□ -0.59
Msh2P43247 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.38□□□□□ -0.59
Msh2P43247 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.38□□□□□ -0.59
Msh2P43247 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Msh2P43247 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Msh2P43247 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.38□□□□□ -0.59
Msh2P43247 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Msh2P43247 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.38□□□□□ -0.59
Msh2P43247 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Msh2P43247 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Msh2P43247 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms