Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.53□□□□□ -0.72
Cdx2P43241 Gm26443-201ENSMUST00000179610 110 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Gm5254-201ENSMUST00000188353 977 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Gm33707-201ENSMUST00000195135 569 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Cdx2P43241 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.53□□□□□ -0.72
Cdx2P43241 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Gm45481-201ENSMUST00000209717 877 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cdx2P43241 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.53□□□□□ -0.72
Cdx2P43241 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx2P43241 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Cdx2P43241 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx2P43241 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.52□□□□□ -0.72
Cdx2P43241 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.52□□□□□ -0.72
Cdx2P43241 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
Cdx2P43241 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.52□□□□□ -0.72
Cdx2P43241 AC154354.1-203ENSMUST00000225565 1364 ntBASIC10.52□□□□□ -0.72
Cdx2P43241 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx2P43241 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx2P43241 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Cdx2P43241 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx2P43241 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx2P43241 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx2P43241 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx2P43241 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Cdx2P43241 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx2P43241 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.52□□□□□ -0.73
Cdx2P43241 Rgr-203ENSMUST00000225070 4704 ntBASIC10.52□□□□□ -0.73
Cdx2P43241 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cdx2P43241 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Gm12028-201ENSMUST00000118065 436 ntBASIC10.52□□□□□ -0.73
Cdx2P43241 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Gm7928-201ENSMUST00000181249 701 ntBASIC10.52□□□□□ -0.73
Cdx2P43241 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Gm27316-201ENSMUST00000184884 277 ntBASIC10.52□□□□□ -0.73
Cdx2P43241 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.52□□□□□ -0.73
Cdx2P43241 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Cdx2P43241 Gm18123-201ENSMUST00000210874 822 ntBASIC10.52□□□□□ -0.73
Cdx2P43241 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.52□□□□□ -0.73
Cdx2P43241 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cdx2P43241 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cdx2P43241 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.52□□□□□ -0.73
Cdx2P43241 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.52□□□□□ -0.73
Cdx2P43241 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC10.52□□□□□ -0.73
Cdx2P43241 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cdx2P43241 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cdx2P43241 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cdx2P43241 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.52□□□□□ -0.73
Cdx2P43241 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.52□□□□□ -0.73
Cdx2P43241 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx2P43241 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.51□□□□□ -0.73
Cdx2P43241 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Cdx2P43241 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Cdx2P43241 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cdx2P43241 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdx2P43241 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.51□□□□□ -0.73
Cdx2P43241 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms