Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Cd9P40240 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Cd9P40240 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cd9P40240 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cd9P40240 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cd9P40240 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.91□□□□□ -0.66
Cd9P40240 Gm13019-201ENSMUST00000120000 276 ntBASIC10.91□□□□□ -0.66
Cd9P40240 Gm12274-201ENSMUST00000120062 385 ntBASIC10.91□□□□□ -0.66
Cd9P40240 Mir1893-201ENSMUST00000122565 83 ntBASIC10.91□□□□□ -0.66
Cd9P40240 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.91□□□□□ -0.66
Cd9P40240 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.91□□□□□ -0.66
Cd9P40240 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.91□□□□□ -0.66
Cd9P40240 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.91□□□□□ -0.66
Cd9P40240 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.91□□□□□ -0.66
Cd9P40240 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.91□□□□□ -0.66
Cd9P40240 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.91□□□□□ -0.66
Cd9P40240 Nsd1-205ENSMUST00000224693 852 ntBASIC10.91□□□□□ -0.66
Cd9P40240 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.91□□□□□ -0.66
Cd9P40240 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cd9P40240 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cd9P40240 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cd9P40240 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd9P40240 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cd9P40240 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Cd9P40240 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cd9P40240 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.9□□□□□ -0.66
Cd9P40240 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Cd9P40240 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cd9P40240 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cd9P40240 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Cd9P40240 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cd9P40240 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.9□□□□□ -0.66
Cd9P40240 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Cd9P40240 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Gm26134-201ENSMUST00000178484 110 ntBASIC10.9□□□□□ -0.66
Cd9P40240 Mir7076-201ENSMUST00000183519 74 ntBASIC10.9□□□□□ -0.66
Cd9P40240 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.9□□□□□ -0.66
Cd9P40240 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.9□□□□□ -0.66
Cd9P40240 Gm39288-201ENSMUST00000210554 446 ntBASIC10.9□□□□□ -0.66
Cd9P40240 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cd9P40240 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.9□□□□□ -0.66
Cd9P40240 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.9□□□□□ -0.66
Cd9P40240 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd9P40240 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.9□□□□□ -0.67
Cd9P40240 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Cd9P40240 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cd9P40240 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cd9P40240 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cd9P40240 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
Cd9P40240 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cd9P40240 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Cd9P40240 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Cd9P40240 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cd9P40240 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Cd9P40240 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms