Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Slc6a11P31650 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Slc6a11P31650 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm11663-201ENSMUST00000117888 290 ntBASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm15617-201ENSMUST00000118973 771 ntBASIC10.53□□□□□ -0.72
Slc6a11P31650 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.53□□□□□ -0.72
Slc6a11P31650 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm3793-201ENSMUST00000204973 672 ntBASIC10.53□□□□□ -0.72
Slc6a11P31650 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.53□□□□□ -0.72
Slc6a11P31650 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.53□□□□□ -0.72
Slc6a11P31650 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm25517-201ENSMUST00000083865 134 ntBASIC10.53□□□□□ -0.72
Slc6a11P31650 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.53□□□□□ -0.72
Slc6a11P31650 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.53□□□□□ -0.72
Slc6a11P31650 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Slc6a11P31650 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a11P31650 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.53□□□□□ -0.72
Slc6a11P31650 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc6a11P31650 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Slc6a11P31650 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.52□□□□□ -0.72
Slc6a11P31650 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Slc6a11P31650 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc6a11P31650 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc6a11P31650 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Slc6a11P31650 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.52□□□□□ -0.72
Slc6a11P31650 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Gm1848-201ENSMUST00000120711 789 ntBASIC10.52□□□□□ -0.73
Slc6a11P31650 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Olfml3-204ENSMUST00000169286 874 ntBASIC10.52□□□□□ -0.73
Slc6a11P31650 Gm8815-201ENSMUST00000173809 620 ntBASIC10.52□□□□□ -0.73
Slc6a11P31650 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.52□□□□□ -0.73
Slc6a11P31650 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Gm5298-201ENSMUST00000201122 892 ntBASIC10.52□□□□□ -0.73
Slc6a11P31650 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Gm19091-201ENSMUST00000208120 978 ntBASIC10.52□□□□□ -0.73
Slc6a11P31650 Gm45575-201ENSMUST00000210283 548 ntBASIC10.52□□□□□ -0.73
Slc6a11P31650 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.52□□□□□ -0.73
Slc6a11P31650 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 AA474408-201ENSMUST00000098110 3339 ntBASIC10.52□□□□□ -0.73
Slc6a11P31650 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a11P31650 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a11P31650 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a11P31650 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a11P31650 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Slc6a11P31650 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a11P31650 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a11P31650 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.51□□□□□ -0.73
Slc6a11P31650 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms