Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pde6aP27664 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.8□□□□□ -0.36
Pde6aP27664 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pde6aP27664 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.8□□□□□ -0.36
Pde6aP27664 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Mir453-201ENSMUST00000104732 82 ntBASIC12.79□□□□□ -0.36
Pde6aP27664 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pde6aP27664 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.79□□□□□ -0.36
Pde6aP27664 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.79□□□□□ -0.36
Pde6aP27664 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.79□□□□□ -0.36
Pde6aP27664 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.79□□□□□ -0.36
Pde6aP27664 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Mir3547-201ENSMUST00000175461 88 ntBASIC12.79□□□□□ -0.36
Pde6aP27664 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.79□□□□□ -0.36
Pde6aP27664 Gm18776-201ENSMUST00000188833 654 ntBASIC12.79□□□□□ -0.36
Pde6aP27664 Gm40414-201ENSMUST00000197608 481 ntBASIC12.79□□□□□ -0.36
Pde6aP27664 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.79□□□□□ -0.36
Pde6aP27664 Gm43671-201ENSMUST00000200422 433 ntBASIC12.79□□□□□ -0.36
Pde6aP27664 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Gm3619-201ENSMUST00000219947 775 ntBASIC12.79□□□□□ -0.36
Pde6aP27664 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.79□□□□□ -0.36
Pde6aP27664 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pde6aP27664 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.79□□□□□ -0.36
Pde6aP27664 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6aP27664 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Pde6aP27664 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.78□□□□□ -0.36
Pde6aP27664 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pde6aP27664 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm12389-201ENSMUST00000117696 418 ntBASIC12.78□□□□□ -0.36
Pde6aP27664 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.78□□□□□ -0.36
Pde6aP27664 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.78□□□□□ -0.36
Pde6aP27664 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.78□□□□□ -0.36
Pde6aP27664 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm23153-201ENSMUST00000175323 313 ntBASIC12.78□□□□□ -0.36
Pde6aP27664 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm28746-201ENSMUST00000187453 380 ntBASIC12.78□□□□□ -0.36
Pde6aP27664 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm7082-201ENSMUST00000209880 969 ntBASIC12.78□□□□□ -0.36
Pde6aP27664 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.78□□□□□ -0.36
Pde6aP27664 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.78□□□□□ -0.36
Pde6aP27664 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms