Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Atf6F6VAN0 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Atf6F6VAN0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atf6F6VAN0 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atf6F6VAN0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Atf6F6VAN0 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atf6F6VAN0 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atf6F6VAN0 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atf6F6VAN0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atf6F6VAN0 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.39□□□□□ -0.59
Atf6F6VAN0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atf6F6VAN0 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Atf6F6VAN0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm6485-201ENSMUST00000160676 439 ntBASIC11.38□□□□□ -0.59
Atf6F6VAN0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm44323-201ENSMUST00000198689 129 ntBASIC11.38□□□□□ -0.59
Atf6F6VAN0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.38□□□□□ -0.59
Atf6F6VAN0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Atf6F6VAN0 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.38□□□□□ -0.59
Atf6F6VAN0 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atf6F6VAN0 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Gm12439-201ENSMUST00000117162 365 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Gm14592-201ENSMUST00000117201 560 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Gm14585-201ENSMUST00000120713 634 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Gm15881-201ENSMUST00000148792 942 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.37□□□□□ -0.59
Atf6F6VAN0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Gm5302-201ENSMUST00000202130 796 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.37□□□□□ -0.59
Atf6F6VAN0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Gm45398-201ENSMUST00000210561 165 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Mt1-202ENSMUST00000211807 1085 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 AC114573.1-201ENSMUST00000224120 1210 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Atf6F6VAN0 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms