Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scaf11E9PZM7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scaf11E9PZM7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scaf11E9PZM7 Gm43972-201ENSMUST00000181398 1467 ntBASIC15.24■□□□□ 0.03
Scaf11E9PZM7 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scaf11E9PZM7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Gm12950-201ENSMUST00000121683 417 ntBASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Gm40414-201ENSMUST00000197608 481 ntBASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Gm8557-201ENSMUST00000220777 475 ntBASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 AC155245.1-201ENSMUST00000222266 1804 ntBASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Gm13135-201ENSMUST00000117628 3121 ntBASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Gm6713-201ENSMUST00000216137 1446 ntBASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Gm37542-201ENSMUST00000192563 2832 ntBASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scaf11E9PZM7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Mir8104-201ENSMUST00000185165 101 ntBASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gm19058-201ENSMUST00000192135 598 ntBASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 AC164978.2-201ENSMUST00000226645 857 ntBASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gm8420-201ENSMUST00000097103 598 ntBASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gm7790-201ENSMUST00000118716 1310 ntBASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gm42651-201ENSMUST00000199851 1339 ntBASIC15.22■□□□□ 0.03
Scaf11E9PZM7 AC154537.1-201ENSMUST00000226101 1304 ntBASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gm45776-201ENSMUST00000212366 1522 ntBASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Gm18806-201ENSMUST00000207607 1775 ntBASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scaf11E9PZM7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Gm16439-201ENSMUST00000100687 564 ntBASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Gm15727-201ENSMUST00000122416 437 ntBASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Gm9515-201ENSMUST00000200276 647 ntBASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Gm5174-201ENSMUST00000171131 1423 ntBASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms