Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Gm8815-201ENSMUST00000173809 620 ntBASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Gm27627-201ENSMUST00000183644 150 ntBASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Gm270-201ENSMUST00000223010 976 ntBASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 AC121574.1-201ENSMUST00000228770 3132 ntBASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccdc28bQ8CEG5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm10748-202ENSMUST00000194396 2379 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm12857-201ENSMUST00000117678 592 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm11663-201ENSMUST00000117888 290 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm27572-201ENSMUST00000183702 255 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm6867-201ENSMUST00000219165 425 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm37975-201ENSMUST00000195494 2099 ntBASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc28bQ8CEG5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccdc28bQ8CEG5 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms