Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm13204-201ENSMUST00000120110 821 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm6441-201ENSMUST00000120983 696 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm26313-201ENSMUST00000157770 308 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm25998-201ENSMUST00000175397 53 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm24954-201ENSMUST00000178831 110 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm7928-201ENSMUST00000181249 701 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Mir8111-201ENSMUST00000184463 137 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm37207-201ENSMUST00000194284 296 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Trav11n-201ENSMUST00000200113 343 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 CT009713.2-201ENSMUST00000225532 1149 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Bcl2-202ENSMUST00000189999 2841 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 AC149588.2-201ENSMUST00000228182 1859 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim52Q8CDV4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm38344-201ENSMUST00000195306 1353 ntBASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm23769-201ENSMUST00000104441 121 ntBASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm16441-201ENSMUST00000138176 924 ntBASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm6038-201ENSMUST00000154310 948 ntBASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm24346-201ENSMUST00000158712 194 ntBASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm7572-201ENSMUST00000182616 766 ntBASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm27316-201ENSMUST00000184884 277 ntBASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 AC154806.7-201ENSMUST00000227998 202 ntBASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim52Q8CDV4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim52Q8CDV4 Gm5159-201ENSMUST00000212733 1652 ntBASIC13.59□□□□□ -0.23
Trim52Q8CDV4 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim52Q8CDV4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim52Q8CDV4 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim52Q8CDV4 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Trim52Q8CDV4 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim52Q8CDV4 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms